species:   Venon
pid:       PID2108
parent:    vna-miR-8-5p
paralog:   
locus:     PDEZ01000024.1:107269-107391
matures:   ['UAGGUGGCUCUGAGGCAUGG', 'AUGCCUCAGAGCCACCUAUA']
srr:       SRR11514758
genome:    /Users/jax/+Genomes/Fungal_genomes/Venon.GCA_002776445.1_ASM277644v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514758.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514758.cram PDEZ01000024.1:107269-107391

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

         **********************                                                             **********************         
CACCUGUGGCCAUGCCUCAGAGCCACCUAUAGGCGUGCCUUAUACCUAUAGAUAGCCCUAAGGUAUAGUAAUAGAUAGGUAUAAGGCAUGCCUAUAGGUGGCUCUGAGGCAUGGCCACAGGUG
(((((((((((((((((((((((((((((((((((((((((((((((((..((.((...........)).))..)))))))))))))))))))))))))))))))))))))))))))))))))
----------------------------------------------------------------------------------------------UAGGUGGCUCUGAGGCAUGG--------- l=20 a=1 c
-----------AUGCCUCAGAGCCACCUAUA-------------------------------------------------------------------------------------------- l=20 a=0 c*
----------------------------------------------------------------------------------------------UAGGUGGCUCUGAGGCAUGG--------- l=20 a=1 ma
-----------AUGCCUCAGAGCCACCUAUA-------------------------------------------------------------------------------------------- l=20 a=0 ma*

----------------------------------------------------------------------------------------------UAGGUGGCUCUGAGGCAUGG--------- l=20 a=1 (c,ma)

mb-01011
ax-1011111
ku-00
ss-110111111110
fn-011
